I had a similar problem a couple of years ago, where the front brake would get spongy and when I would bleed it. I would get some air out and it would firm up for several days and then the problem would re-occurr. This was going on with my CBR and my RC51. I eventually traced it down to the brake fluid I was using. I bought a fresh supply, purged and re-bled the systems and the problem went away.
A trick I picked up years ago is when trying to get the last of the small bubbles out, was to bleed the system at the highest point, which is the master cylinder. Before they put bleed screws in the master cylinders, I would pump up the system, and strap down the lever to maintain the pressure. This compresses any air down to very small bubbles. I would then while holding a rag around the upper banjo fitting, crack the bolt to release the pressure an what little air that was still in the system.
I use the same technique on the newer systems, using the bleed screw on the master cylinder and get the same results.